The 'neutral' space colony of Heliopolis houses Morgenroete, a top-secret weapons research facility specializing in producing the battleship Archangel and five prototype Gundams for the Earth Alliance Force. ZAFT, the rebel army composed of genetically modified humans known as Coordinators, attacks Heliopolis, stealing four of the five prototypes. Civilian Kira Yamato, a Coordinator raised by Natural parents, stumbles upon the Gundam Strike during the attack. He pilots the mobile suit for the Earth Alliance Force in order to protect his Natural friends and finds himself locked in mortal combat with his childhood best friend, Coordinator Athrun Zala, who is now an ace pilot for ZAFT. Their friendship is not the only thing at stake; the survival of an entire race depends on the outcome of this war. (Source: Tokyopop)

C.E. 71: In the midst of war between the Naturals (OMNI) and Coordinators (ZAFT), a unit from ZAFT is dispatched to hijack the Earth Alliance's newly developed mobile suits on the neutral colony of Heliopolis. Orb Civilian Coordinator Kira Yamato attends the technical college on Heliopolis. After ZAFT hijacks 4 of the 5 mobile suits, Kira stumbles upon the last one, Strike, forced to pilot it to save his and his friend's lives. During this confusion, Kira also reunites with his childhood Coordinator friend, Athrun Zala, who ironically turns out to be a ZAFT soldier and one of the hijackers at Heliopolis. Having control of Strike, Kira joins the Earth Alliance boarding the ship known as Archangel, to protect his friends while despairing over becoming the enemy of his childhood friend and people.
 
Note: An HD remaster was broadcasting starting on December 23, 2011 with two recap episodes cut, including new and updated animation, conversion to 16:9, and updated music.

 It is now Cosmic Era (C.E.) 75, two years after the dismantlement of the Destiny Plan, but warfare still continues to rage on between Naturals and Coordinators. Independence movements are now sprouting up across Earth, and invasions by Blue Cosmos grow exponentially stronger... To deal with these predicaments, a World Peace Supervision Organization known as COMPASS has been established, with PLANT Chairwoman Lacus Clyne as the founding leader. Kira Yamato and the others, as its new members, intervene into various battles for the sake of this peace. However, as these battles take place, an emergent nation known as 'FOUNDATION' appears, and they propose a joint operation to attack the Blue Cosmos Headquarters. Will Destiny run its course, or will Kira still have the Freedom to resist against impossible odds?

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