A sergeant by the name of Sousuke Sagara is assigned an important task. That of guarding high school girl Chidori Kaname. Sousuke is a military genius, gaining high rank at an early age, but because of his strange upbringing, he lacks social skill. Now, he finds himself as a fish out of water as he attempts to protect a girl from an evil organization and turn in his school work on time.
 
(Source: Anime News Network)

Jindai High School was a relatively safe place, right up until Sousuke Sagaka transferred there. A total nut, he wreaks havoc on the school's student body and gets into a world of trouble with the teachers! But there's more to Sousuke than meets the eye&mdash;not just a hell-raising student, he's actually a member of an elite military unit, on an undercover mission to protect the beautiful schoolgirl Kaname Chidori from the KGB. 
(Source: Tokyopop)

Tells the same story as Full Metal Panic Second Raid and is as such, also based on the novels The End Of Day By Day. 
Leaving off after the original series, this series tells of Sousuke and Mithril as they fight Amalgam. Like the original series, but both sides have gotten a bit more aggressive...

Tetsuro Kasahara manga adaptation of Shouji Gatou eponymous novel.

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